Publication LisT

Zebrafish neuromesodermal progenitors undergo a critical state transition in vivo. Toh, K., Saunders, D., Verd, B., & Steventon, B. (2022) IScience. 25 (10)

The unappreciated role of cell movements in pattern formation. Fulton, T., Verd, B* & Steventon, B* (2022) Royal Society Open Science. 9 (4), 211293

Approximated gene expression trajectories (AGETs) for gene regulatory network inference in cell tracks.  Spiess, K.,  Taylor, SE., Fulton, T., Toh, K., Saunders, D., Hwang, S., Wang, Y., Paige, B*., Steventon, B* & Verd, B* (2021) bioRxiv. Currently under review in Development.

Interdisciplinary approaches to dynamics in biology

Verd, B* & Pérez-Carrasco, R*. (2021) Interface Focus 11 (3) 20210021

A gene regulatory network that can adjust developmental timing
to in vivo and in vitro cell differentiation dynamics. Fulton, T., Spiess, K., Thomson, L., Wang, Y., Clark, B., Hwang, S., Paige, B., Verd, B* & Steventon, B*. 

(2021) bioRxiv. Currently under review in Development.

A deep learning approach for staging embryonic tissue isolates with small data. 

Pond, AJR., Hwang, S., Verd, B* & Steventon, B*. (2021) Plos one 16.1: e0244151.

Dynamic positional information: Patterning mechanism versus precision in gradient-driven systems. Jaeger, J., & Verd, B. (2019) Current Topics in Developmental Biology. 

Vol. 137. Academic Press, 2020. 219-246. 

Modularity, criticality, and evolvability of a developmental gene regulatory network. 

Verd, B*., Monk, N. A., & Jaeger, J*. (2019). Elife, 8, e42832. 

Drawing to Extend Waddington’s Epigenetic Landscape. 

Anderson, G., Verd, B., & Jaeger, J. (2019). Leonardo, 1-14.  

A damped oscillator imposes temporal order on posterior gap gene expression in Drosophila. 

Verd, B*., Clark, E., Wotton, K. R., Janssens, H., Jiménez-Guri, E., Crombach, A., & Jaeger, J*. (2018). PLoS biology, 16(2), e2003174.

Dynamic maternal gradients control timing and shift-rates for Drosophila gap gene expression. 

Verd, B*., Crombach, A., & Jaeger, J*. (2017). PLoS computational biology, 13(2).

Classification of transient behaviours in a time-dependent toggle switch model. 

Verd, B., Crombach, A., & Jaeger, J. (2014). BMC systems biology, 8(1), 43.